Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888664.1_cds_XP_016443269.1_38444
CDS Infomation

[gene=LOC107768654] [db_xref=GeneID:107768654] [protein=pentatricopeptide repeat-containing protein At2g01860-like] [protein_id=XP_016443269.1] [location=complement(113514..115040)] [gbkey=CDS]
Sequence

ATGCTCAGCCGGAGTTGTTGCATGTTTTCGACCACCCATGAGACCCTTCCTTGGTCTTCA
TCTACACATCCCATCTCACAGAGTTGTAGTACCAGTACAGCTGCTTCTGGAACACCTTCT
TCAAGTCTTGGAAGAAGAGGGGAAATAGTTGTTTTTATGGCTGTTTGTAGTAACAGAACT
AACCACAGAAAACTCCCAAAGAACCTCAGCAATCCTCGACGATCCAAGCTTCCACATGAC
ATGGACTATAGCTTCAAAAGGATCTTGTACGAGGATGCTGACGAGATTACCCAGCAGCCA
ACTATTGACACTTTCACTACTGCTGATGAGGAAATTGATGAAGAATTGGAAGTGGAAGTA
GAAGAGACTATATGGGAGTCGGATGAGATGGAAGCAATTTCATCTCTTTTCAAAGGGAGG
ATCCCTCAGAAACCCGGTAAATTGAATAGAGAAAGGCCTCTGCCTCTGCCCCTTCCTTAC
AAGATTCGACCTTTAGGACTTCCTACACCAAAAAGATTCTCAAATGTTTCAAGGCAATCC
ATATCAAAGCAAGTGTACAAGAATCCCACTTTCTTGATTGGTTTGGCCAAAGAAATTCAG
AGCCTCTCAACAGAAGAAAATGTATCAAAGGTTCTCAGTAAGTGGGGTCCATTTCTTCGA
AAAGGATCATTATCGTTGACAATCCGAGAGTTGGGTTACTTGGGCCTTCCTGAGAGAGCT
CTGCAAACATTCTGTTGGGTGAAAAAACAACCCCATCTTTTCCCGGATGATCACGTTCTT
GCTTCTACAATTGAAGTTTTGGCAGGGTCAAACGAGTTAAAAGTGCCTTTTGATTTGGAT
AAGTTCACTGGCTTGGCTAGTCGGAGTGTGTATGAAGCAATGTTAAGGGGTTTTATCAAA
GGAGGAAGCCTGAAGCTTGCTTTGAAGCTTCTCTCAATAGCTAAGGGATGTAATAGAGTG
CTTGGTACTGGGGTGTATGCTAAGCTAATATTGGAGCTTGGTAAGGATCCTGATAAAAGC
ACACTTGTCTTGGCATTGTTAGAGGAGCTTGCTGTGCGAGATGATCTGGATTTGACTCCA
CAAGACTGTACAGCTATTATGAAAATTTGCATTAGGCTGGGAAGATTCGAGATTGTGGAG
GGACTATATGATTGGTTCAGGAAATCTGGTGGCAATCCAAGTGTAGTTATGTATACTACT
CTGATTCACTGTCGTTATTCAGCAAACAAATATAGGGAGGCGTTAGCCATGCTATGGGAA
ATGGAGGCTTCAAATTGCCTTTTTGATCTTCCAGCTTATCGTGTAGTGATTAAGCTATTT
GTTGCTTTGGACGATGTCTCAAGGGCTGTGCGCTATTTCTCTAAACTTAAGGAAGCAGGT
TTTAGTCCAACATTTGATATATACTGCAGCTTGATTAAAATTTATATGGCTTCTGGAAGG
CTGGCCAAGTGTGAAGATATCCGCAAGGAGGCAGAGATGGCTGGATTCAGGTTGAACGAA
CATACAATGTCAAAGTTGCAACAGTAA

Peptide Sequence

PEP ID

XP_016443269.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like [Nicotiana tabacum]
Sequence

MLSRSCCMFSTTHETLPWSSSTHPISQSCSTSTAASGTPSSSLGRRGEIVVFMAVCSNRT
NHRKLPKNLSNPRRSKLPHDMDYSFKRILYEDADEITQQPTIDTFTTADEEIDEELEVEV
EETIWESDEMEAISSLFKGRIPQKPGKLNRERPLPLPLPYKIRPLGLPTPKRFSNVSRQS
ISKQVYKNPTFLIGLAKEIQSLSTEENVSKVLSKWGPFLRKGSLSLTIRELGYLGLPERA
LQTFCWVKKQPHLFPDDHVLASTIEVLAGSNELKVPFDLDKFTGLASRSVYEAMLRGFIK
GGSLKLALKLLSIAKGCNRVLGTGVYAKLILELGKDPDKSTLVLALLEELAVRDDLDLTP
QDCTAIMKICIRLGRFEIVEGLYDWFRKSGGNPSVVMYTTLIHCRYSANKYREALAMLWE
MEASNCLFDLPAYRVVIKLFVALDDVSRAVRYFSKLKEAGFSPTFDIYCSLIKIYMASGR
LAKCEDIRKEAEMAGFRLNEHTMSKLQQ

Transcript Sequence

Gene sequence data has not been registered.